Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.76□□□□□ -0.05
Pde6dO55057 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.76□□□□□ -0.05
Pde6dO55057 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.76□□□□□ -0.05
Pde6dO55057 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pde6dO55057 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.75□□□□□ -0.05
Pde6dO55057 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pde6dO55057 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pde6dO55057 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pde6dO55057 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pde6dO55057 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.74□□□□□ -0.05
Pde6dO55057 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.74□□□□□ -0.05
Pde6dO55057 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pde6dO55057 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pde6dO55057 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.74□□□□□ -0.05
Pde6dO55057 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pde6dO55057 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.73□□□□□ -0.05
Pde6dO55057 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pde6dO55057 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pde6dO55057 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pde6dO55057 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Pde6dO55057 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pde6dO55057 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pde6dO55057 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Pde6dO55057 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pde6dO55057 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pde6dO55057 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pde6dO55057 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pde6dO55057 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pde6dO55057 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pde6dO55057 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pde6dO55057 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pde6dO55057 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.7□□□□□ -0.06
Pde6dO55057 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.7□□□□□ -0.06
Pde6dO55057 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms