Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.84■□□□□ 0.45
Clk4O35493 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clk4O35493 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Clk4O35493 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clk4O35493 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clk4O35493 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk4O35493 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clk4O35493 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clk4O35493 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.83■□□□□ 0.45
Clk4O35493 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.83■□□□□ 0.45
Clk4O35493 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Clk4O35493 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clk4O35493 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clk4O35493 Gm13534-201ENSMUST00000121169 513 ntBASIC17.83■□□□□ 0.44
Clk4O35493 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clk4O35493 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clk4O35493 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clk4O35493 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Clk4O35493 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clk4O35493 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.82■□□□□ 0.44
Clk4O35493 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Clk4O35493 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.82■□□□□ 0.44
Clk4O35493 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clk4O35493 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk4O35493 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
Clk4O35493 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Gm42569-201ENSMUST00000200539 472 ntBASIC17.81■□□□□ 0.44
Clk4O35493 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk4O35493 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clk4O35493 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Clk4O35493 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clk4O35493 Gm27405-201ENSMUST00000184201 112 ntBASIC17.8■□□□□ 0.44
Clk4O35493 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.8■□□□□ 0.44
Clk4O35493 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.8■□□□□ 0.44
Clk4O35493 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.8■□□□□ 0.44
Clk4O35493 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clk4O35493 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clk4O35493 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.79■□□□□ 0.44
Clk4O35493 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.79■□□□□ 0.44
Clk4O35493 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clk4O35493 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clk4O35493 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clk4O35493 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Gm26571-201ENSMUST00000181399 666 ntBASIC17.79■□□□□ 0.44
Clk4O35493 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.79■□□□□ 0.44
Clk4O35493 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.79■□□□□ 0.44
Clk4O35493 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clk4O35493 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.79■□□□□ 0.44
Clk4O35493 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.79■□□□□ 0.44
Clk4O35493 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clk4O35493 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk4O35493 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk4O35493 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk4O35493 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Clk4O35493 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clk4O35493 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.78■□□□□ 0.44
Clk4O35493 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clk4O35493 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Clk4O35493 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms