Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.71■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.71■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mindy4b-psA0A1W2P7H6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms