Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-3A0A140T8Q0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-3A0A140T8Q0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Igkv3-3A0A140T8Q0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-3A0A140T8Q0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-3A0A140T8Q0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC11.27□□□□□ -0.6
Igkv3-3A0A140T8Q0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.27□□□□□ -0.61
Igkv3-3A0A140T8Q0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Igkv3-3A0A140T8Q0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gm10232-201ENSMUST00000089221 720 ntBASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Igkv3-3A0A140T8Q0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gm43231-201ENSMUST00000202960 2258 ntBASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Igkv3-3A0A140T8Q0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms