Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gm7143-201ENSMUST00000222811 859 ntBASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13n-2A0A0G2JF93 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-2A0A0G2JF93 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms