Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Gm15853-202ENSMUST00000195518 2041 ntBASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Gm45444-201ENSMUST00000211394 898 ntBASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv8-28A0A0G2JE47 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv8-28A0A0G2JE47 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Gm5921-201ENSMUST00000075898 882 ntBASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv8-28A0A0G2JE47 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv8-28A0A0G2JE47 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv8-28A0A0G2JE47 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv8-28A0A0G2JE47 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms