Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav11A0A0B4J1J9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav11A0A0B4J1J9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav11A0A0B4J1J9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav11A0A0B4J1J9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav11A0A0B4J1J9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav11A0A0B4J1J9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav11A0A0B4J1J9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav11A0A0B4J1J9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav11A0A0B4J1J9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav11A0A0B4J1J9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav11A0A0B4J1J9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav11A0A0B4J1J9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms