Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15-2-dv6-2A0A075B650 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.27■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Golgb1-201ENSMUST00000023534 498 ntBASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-2-dv6-2A0A075B650 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms