Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8-1A0A075B641 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Gm11175-201ENSMUST00000116172 543 ntBASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8-1A0A075B641 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav8-1A0A075B641 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Trav8-1A0A075B641 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav8-1A0A075B641 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8-1A0A075B641 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Gm12366-201ENSMUST00000121722 873 ntBASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Gm5786-201ENSMUST00000085368 882 ntBASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8-1A0A075B641 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms