Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Gm9806-201ENSMUST00000051080 552 ntBASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4n-4A0A075B615 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Gm7143-201ENSMUST00000222811 859 ntBASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4n-4A0A075B615 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4n-4A0A075B615 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Gm8969-201ENSMUST00000199694 526 ntBASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4n-4A0A075B615 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4n-4A0A075B615 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4n-4A0A075B615 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4n-4A0A075B615 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav4n-4A0A075B615 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4n-4A0A075B615 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4n-4A0A075B615 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4n-4A0A075B615 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms