Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-5A0A075B604 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-5A0A075B604 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Mir5133-201ENSMUST00000174955 77 ntBASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-5A0A075B604 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-5A0A075B604 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Gm10602-201ENSMUST00000098239 609 ntBASIC15.27■□□□□ 0.04
Trav7n-5A0A075B604 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav7n-5A0A075B604 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7n-5A0A075B604 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav7n-5A0A075B604 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7n-5A0A075B604 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-5A0A075B604 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-5A0A075B604 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-5A0A075B604 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Trav7n-5A0A075B604 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-5A0A075B604 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms