Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-54A0A075B5W5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-54A0A075B5W5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Nespas-201ENSMUST00000143738 1083 ntBASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-54A0A075B5W5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.68■□□□□ 0.26
Ighv1-54A0A075B5W5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-54A0A075B5W5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-54A0A075B5W5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ighv1-54A0A075B5W5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.68■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.68■□□□□ 0.26
Ighv1-54A0A075B5W5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.67■□□□□ 0.26
Ighv1-54A0A075B5W5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-54A0A075B5W5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-54A0A075B5W5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-54A0A075B5W5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-54A0A075B5W5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-54A0A075B5W5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-54A0A075B5W5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm27405-201ENSMUST00000184201 112 ntBASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-54A0A075B5W5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-54A0A075B5W5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-54A0A075B5W5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-54A0A075B5W5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms