Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm16409-201ENSMUST00000100510 747 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm14056-201ENSMUST00000117198 642 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm13988-201ENSMUST00000119363 288 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm5883-201ENSMUST00000120735 495 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm9143-201ENSMUST00000120745 745 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm8172-201ENSMUST00000120762 750 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm25320-201ENSMUST00000122551 324 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm24899-201ENSMUST00000158892 73 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm26413-202ENSMUST00000198972 127 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm6308-201ENSMUST00000203226 313 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 CT025561.1-201ENSMUST00000214972 674 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 AC125117.2-201ENSMUST00000228344 1140 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Vps53Q8CCB4 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm42996-201ENSMUST00000196116 1636 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm25762-201ENSMUST00000103984 132 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm26469-201ENSMUST00000116765 121 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm5530-201ENSMUST00000117185 985 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm12178-201ENSMUST00000120545 330 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm12180-201ENSMUST00000120905 661 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm43080-201ENSMUST00000199006 2643 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm16273-201ENSMUST00000202238 268 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm18402-201ENSMUST00000203834 586 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm36938-201ENSMUST00000191612 2696 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Gm37534-201ENSMUST00000194483 5222 ntBASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Vps53Q8CCB4 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Vps53Q8CCB4 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms