Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Mink1-204ENSMUST00000102558 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Gm21054-201ENSMUST00000203981 380 ntBASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 Gm5654-201ENSMUST00000217787 475 ntBASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 CT010480.3-201ENSMUST00000224712 259 ntBASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 AC154361.1-201ENSMUST00000225694 745 ntBASIC9.03□□□□□ -0.96
Cacna1fQ9JIS7 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cacna1fQ9JIS7 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cacna1fQ9JIS7 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC9.02□□□□□ -0.96
Cacna1fQ9JIS7 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cacna1fQ9JIS7 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cacna1fQ9JIS7 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC9.02□□□□□ -0.96
Cacna1fQ9JIS7 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm42572-201ENSMUST00000202292 3378 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Cblb-205ENSMUST00000227756 3378 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm44090-201ENSMUST00000204669 1834 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm13240-201ENSMUST00000120042 565 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm15192-201ENSMUST00000121005 293 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm11882-201ENSMUST00000121463 506 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm27185-201ENSMUST00000184296 247 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm8575-201ENSMUST00000210262 521 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 AC155834.1-201ENSMUST00000220033 498 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Gm43686-201ENSMUST00000197351 2439 ntBASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cacna1fQ9JIS7 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm11945-201ENSMUST00000120551 476 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm2735-201ENSMUST00000136133 277 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm22035-201ENSMUST00000157284 228 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm36961-201ENSMUST00000191980 132 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm18428-201ENSMUST00000194986 791 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm4977-201ENSMUST00000215709 1262 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 AC157212.1-201ENSMUST00000228398 1075 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 AC164437.4-202ENSMUST00000228794 2413 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Gm44610-201ENSMUST00000209012 3827 ntBASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC9.01□□□□□ -0.97
Cacna1fQ9JIS7 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms