Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rbfox1Q9JJ43 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rbfox1Q9JJ43 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Rbfox1Q9JJ43 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rbfox1Q9JJ43 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rbfox1Q9JJ43 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Mir7075-201ENSMUST00000184187 82 ntBASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rbfox1Q9JJ43 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.88■□□□□ 0.13
Rbfox1Q9JJ43 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms