Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp1bQ9EPL6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp1bQ9EPL6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Mmp1bQ9EPL6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp1bQ9EPL6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp1bQ9EPL6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Gm21956-201ENSMUST00000179946 522 ntBASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp1bQ9EPL6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Gm12821-201ENSMUST00000120022 600 ntBASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Mmp1bQ9EPL6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Mmp1bQ9EPL6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp1bQ9EPL6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp1bQ9EPL6 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms