Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Q9CYI0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Q9CYI0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CYI0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.69■□□□□ 0.9
Q9CYI0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.69■□□□□ 0.9
Q9CYI0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.69■□□□□ 0.9
Q9CYI0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Q9CYI0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Q9CYI0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Q9CYI0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CYI0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.68■□□□□ 0.9
Q9CYI0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Q9CYI0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.68■□□□□ 0.9
Q9CYI0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Q9CYI0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.68■□□□□ 0.9
Q9CYI0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CYI0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Q9CYI0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Q9CYI0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.67■□□□□ 0.9
Q9CYI0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CYI0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.66■□□□□ 0.9
Q9CYI0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CYI0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Q9CYI0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Q9CYI0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Q9CYI0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CYI0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.66■□□□□ 0.9
Q9CYI0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CYI0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Q9CYI0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Q9CYI0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.66■□□□□ 0.9
Q9CYI0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.66■□□□□ 0.9
Q9CYI0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Q9CYI0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Q9CYI0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CYI0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CYI0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.65■□□□□ 0.9
Q9CYI0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.65■□□□□ 0.9
Q9CYI0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CYI0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Q9CYI0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.65■□□□□ 0.9
Q9CYI0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Q9CYI0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.65■□□□□ 0.9
Q9CYI0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CYI0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CYI0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Q9CYI0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CYI0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CYI0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CYI0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CYI0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.64■□□□□ 0.89
Q9CYI0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CYI0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Q9CYI0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.64■□□□□ 0.89
Q9CYI0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.64■□□□□ 0.89
Q9CYI0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Q9CYI0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CYI0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CYI0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CYI0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CYI0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CYI0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CYI0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms