Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl39lQ9CQD0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.27□□□□□ -0.44
Rpl39lQ9CQD0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Gm27502-201ENSMUST00000183495 199 ntBASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl39lQ9CQD0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl39lQ9CQD0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39lQ9CQD0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39lQ9CQD0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Gm14523-201ENSMUST00000117260 558 ntBASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39lQ9CQD0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms