Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tpgs1Q99MS8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tpgs1Q99MS8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tpgs1Q99MS8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tpgs1Q99MS8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.58■□□□□ 0.72
Tpgs1Q99MS8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpgs1Q99MS8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Tpgs1Q99MS8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpgs1Q99MS8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Tpgs1Q99MS8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tpgs1Q99MS8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpgs1Q99MS8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tpgs1Q99MS8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tpgs1Q99MS8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tpgs1Q99MS8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.54■□□□□ 0.72
Tpgs1Q99MS8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpgs1Q99MS8 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Tpgs1Q99MS8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.52■□□□□ 0.71
Tpgs1Q99MS8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpgs1Q99MS8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tpgs1Q99MS8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms