Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prdm9Q96EQ9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prdm9Q96EQ9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.46■□□□□ 0.55
Prdm9Q96EQ9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Prdm9Q96EQ9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prdm9Q96EQ9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prdm9Q96EQ9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prdm9Q96EQ9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.46■□□□□ 0.54
Prdm9Q96EQ9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Prdm9Q96EQ9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Gm26524-201ENSMUST00000192339 390 ntBASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prdm9Q96EQ9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Gm27011-201ENSMUST00000182352 972 ntBASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prdm9Q96EQ9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prdm9Q96EQ9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Rab3c-203ENSMUST00000224180 967 ntBASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm9Q96EQ9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm9Q96EQ9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms