Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb20Q91XZ9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb20Q91XZ9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb20Q91XZ9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Gm42660-201ENSMUST00000197733 947 ntBASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Thoc7-209ENSMUST00000225325 765 ntBASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb20Q91XZ9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb20Q91XZ9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb20Q91XZ9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb20Q91XZ9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms