Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb2Q91XX7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb2Q91XX7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgb2Q91XX7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhgb2Q91XX7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Gm12922-201ENSMUST00000120626 809 ntBASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb2Q91XX7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Gm45102-201ENSMUST00000207427 857 ntBASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgb2Q91XX7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb2Q91XX7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms