Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.86■□□□□ 0.93
Ddx39aQ8VDW0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx39aQ8VDW0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx39aQ8VDW0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx39aQ8VDW0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Gm13168-201ENSMUST00000121771 632 ntBASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Trmt13-210ENSMUST00000198454 880 ntBASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx39aQ8VDW0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Ddx39aQ8VDW0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx39aQ8VDW0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx39aQ8VDW0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx39aQ8VDW0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Gm8520-201ENSMUST00000186517 868 ntBASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx39aQ8VDW0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.81■□□□□ 0.92
Ddx39aQ8VDW0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx39aQ8VDW0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Gm12896-201ENSMUST00000118430 226 ntBASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ddx39aQ8VDW0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx39aQ8VDW0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx39aQ8VDW0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx39aQ8VDW0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms