Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Gm10033-202ENSMUST00000211874 928 ntBASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Golph3-205ENSMUST00000228671 2842 ntBASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacnb1Q8R3Z5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cacnb1Q8R3Z5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cacnb1Q8R3Z5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Cacnb1Q8R3Z5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cacnb1Q8R3Z5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacnb1Q8R3Z5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Gm8495-201ENSMUST00000188740 694 ntBASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacnb1Q8R3Z5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacnb1Q8R3Z5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacnb1Q8R3Z5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Gm18671-201ENSMUST00000214826 683 ntBASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacnb1Q8R3Z5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Gm13146-201ENSMUST00000118508 780 ntBASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 AC154616.1-201ENSMUST00000226995 804 ntBASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacnb1Q8R3Z5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.83■□□□□ 0.93
Cacnb1Q8R3Z5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms