Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vmn1r28Q8R2C9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Vmn1r28Q8R2C9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.21■□□□□ 0.34
Vmn1r28Q8R2C9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Vmn1r28Q8R2C9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r28Q8R2C9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r28Q8R2C9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r28Q8R2C9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r28Q8R2C9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r28Q8R2C9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r28Q8R2C9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms