Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim31Q8R0K2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Gm18671-201ENSMUST00000214826 683 ntBASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim31Q8R0K2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim31Q8R0K2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Reep4-203ENSMUST00000226563 1444 ntBASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim31Q8R0K2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Gm10033-202ENSMUST00000211874 928 ntBASIC18.22■□□□□ 0.51
Trim31Q8R0K2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim31Q8R0K2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Gm26571-201ENSMUST00000181399 666 ntBASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Gm42569-201ENSMUST00000200539 472 ntBASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim31Q8R0K2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.21■□□□□ 0.5
Trim31Q8R0K2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim31Q8R0K2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms