Protein–RNA interactions for Protein: Q8K297

Colgalt1, Procollagen galactosyltransferase 1, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colgalt1Q8K297 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Gm5643-201ENSMUST00000117081 966 ntBASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Gm2559-201ENSMUST00000201323 363 ntBASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Colgalt1Q8K297 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Colgalt1Q8K297 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Colgalt1Q8K297 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Colgalt1Q8K297 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Colgalt1Q8K297 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Dio3-201ENSMUST00000097228 1449 ntBASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Colgalt1Q8K297 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Colgalt1Q8K297 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.14■□□□□ 0.81
Colgalt1Q8K297 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.14■□□□□ 0.81
Colgalt1Q8K297 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Colgalt1Q8K297 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Colgalt1Q8K297 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Colgalt1Q8K297 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Colgalt1Q8K297 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms