Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rfwd3Q8CIK8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Gm26571-201ENSMUST00000181399 666 ntBASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfwd3Q8CIK8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 AV356131-201ENSMUST00000206201 750 ntBASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rfwd3Q8CIK8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfwd3Q8CIK8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfwd3Q8CIK8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Gm13534-201ENSMUST00000121169 513 ntBASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rfwd3Q8CIK8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfwd3Q8CIK8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Rfwd3Q8CIK8 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.52■□□□□ 0.4
Rfwd3Q8CIK8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.52■□□□□ 0.4
Rfwd3Q8CIK8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rfwd3Q8CIK8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms