Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Smc4Q8CG47 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Smc4Q8CG47 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc4Q8CG47 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Smc4Q8CG47 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Smc4Q8CG47 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Smc4Q8CG47 AC124603.1-201ENSMUST00000223843 308 ntBASIC23.13■■□□□ 1.29
Smc4Q8CG47 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Smc4Q8CG47 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc4Q8CG47 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc4Q8CG47 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc4Q8CG47 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc4Q8CG47 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.11■■□□□ 1.29
Smc4Q8CG47 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.1■■□□□ 1.29
Smc4Q8CG47 AC126028.2-201ENSMUST00000228100 1833 ntBASIC23.1■■□□□ 1.29
Smc4Q8CG47 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.1■■□□□ 1.29
Smc4Q8CG47 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.1■■□□□ 1.29
Smc4Q8CG47 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.1■■□□□ 1.29
Smc4Q8CG47 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc4Q8CG47 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
Smc4Q8CG47 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Gm20760-201ENSMUST00000179197 648 ntBASIC23.09■■□□□ 1.29
Smc4Q8CG47 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Smc4Q8CG47 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smc4Q8CG47 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Smc4Q8CG47 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Smc4Q8CG47 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Smc4Q8CG47 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Smc4Q8CG47 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.07■■□□□ 1.28
Smc4Q8CG47 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Gm12527-201ENSMUST00000117967 564 ntBASIC23.07■■□□□ 1.28
Smc4Q8CG47 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Gm20049-201ENSMUST00000219950 730 ntBASIC23.07■■□□□ 1.28
Smc4Q8CG47 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Smc4Q8CG47 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Smc4Q8CG47 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms