Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Ska3Q8C263 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ska3Q8C263 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska3Q8C263 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.58■□□□□ 0.4
Ska3Q8C263 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ska3Q8C263 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ska3Q8C263 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska3Q8C263 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska3Q8C263 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.57■□□□□ 0.4
Ska3Q8C263 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska3Q8C263 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.57■□□□□ 0.4
Ska3Q8C263 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Ska3Q8C263 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.57■□□□□ 0.4
Ska3Q8C263 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska3Q8C263 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ska3Q8C263 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska3Q8C263 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ska3Q8C263 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska3Q8C263 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
Ska3Q8C263 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.56■□□□□ 0.4
Ska3Q8C263 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.56■□□□□ 0.4
Ska3Q8C263 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.56■□□□□ 0.4
Ska3Q8C263 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ska3Q8C263 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Gm7514-201ENSMUST00000209475 934 ntBASIC17.56■□□□□ 0.4
Ska3Q8C263 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ska3Q8C263 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ska3Q8C263 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ska3Q8C263 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ska3Q8C263 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ska3Q8C263 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.55■□□□□ 0.4
Ska3Q8C263 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ska3Q8C263 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ska3Q8C263 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ska3Q8C263 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.54■□□□□ 0.4
Ska3Q8C263 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Ska3Q8C263 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ska3Q8C263 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ska3Q8C263 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ska3Q8C263 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.53■□□□□ 0.4
Ska3Q8C263 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ska3Q8C263 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ska3Q8C263 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ska3Q8C263 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.52■□□□□ 0.4
Ska3Q8C263 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska3Q8C263 Gm27405-201ENSMUST00000184201 112 ntBASIC17.52■□□□□ 0.4
Ska3Q8C263 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.52■□□□□ 0.4
Ska3Q8C263 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.52■□□□□ 0.4
Ska3Q8C263 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ska3Q8C263 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms