Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn3bQ8BHK2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn3bQ8BHK2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn3bQ8BHK2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scn3bQ8BHK2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Scn3bQ8BHK2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn3bQ8BHK2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn3bQ8BHK2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scn3bQ8BHK2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms