Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Gm27275-201ENSMUST00000184318 272 ntBASIC17.87■□□□□ 0.45
Vrk1Q80X41 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Golph3-202ENSMUST00000226517 2359 ntBASIC17.87■□□□□ 0.45
Vrk1Q80X41 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Gm12896-201ENSMUST00000118430 226 ntBASIC17.86■□□□□ 0.45
Vrk1Q80X41 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Vrk1Q80X41 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vrk1Q80X41 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vrk1Q80X41 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Vrk1Q80X41 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.84■□□□□ 0.45
Vrk1Q80X41 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vrk1Q80X41 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vrk1Q80X41 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Gm2559-201ENSMUST00000201323 363 ntBASIC17.82■□□□□ 0.44
Vrk1Q80X41 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vrk1Q80X41 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vrk1Q80X41 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.81■□□□□ 0.44
Vrk1Q80X41 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vrk1Q80X41 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms