Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.42■□□□□ 0.7
Prdm4Q80V63 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.42■□□□□ 0.7
Prdm4Q80V63 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.42■□□□□ 0.7
Prdm4Q80V63 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm4Q80V63 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm4Q80V63 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.4■□□□□ 0.7
Prdm4Q80V63 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.4■□□□□ 0.7
Prdm4Q80V63 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Prdm4Q80V63 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prdm4Q80V63 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.39■□□□□ 0.69
Prdm4Q80V63 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.39■□□□□ 0.69
Prdm4Q80V63 Gm13241-201ENSMUST00000094493 780 ntBASIC19.39■□□□□ 0.69
Prdm4Q80V63 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.39■□□□□ 0.69
Prdm4Q80V63 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prdm4Q80V63 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm4Q80V63 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.37■□□□□ 0.69
Prdm4Q80V63 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm4Q80V63 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm4Q80V63 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.35■□□□□ 0.69
Prdm4Q80V63 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Mir6236-201ENSMUST00000184437 123 ntBASIC19.35■□□□□ 0.69
Prdm4Q80V63 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.35■□□□□ 0.69
Prdm4Q80V63 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.35■□□□□ 0.69
Prdm4Q80V63 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm4Q80V63 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms