Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d21Q7TSG5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
Sh3d21Q7TSG5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Gm13234-201ENSMUST00000120010 747 ntBASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Gm5874-201ENSMUST00000096101 508 ntBASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.48■□□□□ 0.87
Sh3d21Q7TSG5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Gm15039-201ENSMUST00000118914 875 ntBASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d21Q7TSG5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d21Q7TSG5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d21Q7TSG5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d21Q7TSG5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d21Q7TSG5 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.45■□□□□ 0.86
Sh3d21Q7TSG5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d21Q7TSG5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d21Q7TSG5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d21Q7TSG5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.44■□□□□ 0.86
Sh3d21Q7TSG5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms