Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.26■□□□□ 0.51
Scn4bQ7M729 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn4bQ7M729 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.25■□□□□ 0.51
Scn4bQ7M729 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.25■□□□□ 0.51
Scn4bQ7M729 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn4bQ7M729 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn4bQ7M729 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.23■□□□□ 0.51
Scn4bQ7M729 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn4bQ7M729 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Reep4-203ENSMUST00000226563 1444 ntBASIC18.22■□□□□ 0.51
Scn4bQ7M729 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn4bQ7M729 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.22■□□□□ 0.51
Scn4bQ7M729 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn4bQ7M729 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms