Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-4Q5R1H9 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.33□□□□□ -0.11
Trav7d-4Q5R1H9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7d-4Q5R1H9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7d-4Q5R1H9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7d-4Q5R1H9 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.33□□□□□ -0.11
Trav7d-4Q5R1H9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-4Q5R1H9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-4Q5R1H9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav7d-4Q5R1H9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Gm10420-201ENSMUST00000121713 882 ntBASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Gm43530-201ENSMUST00000195920 274 ntBASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
Trav7d-4Q5R1H9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.29□□□□□ -0.12
Trav7d-4Q5R1H9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.28□□□□□ -0.12
Trav7d-4Q5R1H9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms