Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ccdc106Q3ULM0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.24■□□□□ 0.35
Ccdc106Q3ULM0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc106Q3ULM0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc106Q3ULM0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc106Q3ULM0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Gm13234-201ENSMUST00000120010 747 ntBASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc106Q3ULM0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc106Q3ULM0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc106Q3ULM0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc106Q3ULM0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc106Q3ULM0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc106Q3ULM0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms