Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Nkx3-2P97503 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.63■□□□□ 0.41
Nkx3-2P97503 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx3-2P97503 Gm6420-201ENSMUST00000193885 723 ntBASIC17.63■□□□□ 0.41
Nkx3-2P97503 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx3-2P97503 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx3-2P97503 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nkx3-2P97503 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Gm12441-201ENSMUST00000121806 588 ntBASIC17.62■□□□□ 0.41
Nkx3-2P97503 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.62■□□□□ 0.41
Nkx3-2P97503 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Gm6365-201ENSMUST00000054711 744 ntBASIC17.62■□□□□ 0.41
Nkx3-2P97503 Gm4968-201ENSMUST00000071458 858 ntBASIC17.62■□□□□ 0.41
Nkx3-2P97503 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx3-2P97503 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Gm13148-201ENSMUST00000118892 745 ntBASIC17.61■□□□□ 0.41
Nkx3-2P97503 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nkx3-2P97503 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx3-2P97503 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.6■□□□□ 0.41
Nkx3-2P97503 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.6■□□□□ 0.41
Nkx3-2P97503 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.6■□□□□ 0.41
Nkx3-2P97503 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx3-2P97503 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx3-2P97503 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx3-2P97503 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx3-2P97503 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Gm27011-201ENSMUST00000182352 972 ntBASIC17.58■□□□□ 0.4
Nkx3-2P97503 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx3-2P97503 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx3-2P97503 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx3-2P97503 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx3-2P97503 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.57■□□□□ 0.4
Nkx3-2P97503 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx3-2P97503 Nespas-201ENSMUST00000143738 1083 ntBASIC17.57■□□□□ 0.4
Nkx3-2P97503 Gm6211-202ENSMUST00000167849 925 ntBASIC17.57■□□□□ 0.4
Nkx3-2P97503 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx3-2P97503 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx3-2P97503 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx3-2P97503 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx3-2P97503 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx3-2P97503 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nkx3-2P97503 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.56■□□□□ 0.4
Nkx3-2P97503 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms