Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcgP82348 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcgP82348 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SgcgP82348 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SgcgP82348 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.49■□□□□ 0.55
SgcgP82348 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.49■□□□□ 0.55
SgcgP82348 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcgP82348 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SgcgP82348 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
SgcgP82348 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcgP82348 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcgP82348 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.48■□□□□ 0.55
SgcgP82348 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcgP82348 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcgP82348 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SgcgP82348 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.48■□□□□ 0.55
SgcgP82348 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SgcgP82348 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SgcgP82348 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SgcgP82348 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.48■□□□□ 0.55
SgcgP82348 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcgP82348 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.47■□□□□ 0.55
SgcgP82348 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SgcgP82348 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SgcgP82348 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.47■□□□□ 0.55
SgcgP82348 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcgP82348 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.46■□□□□ 0.55
SgcgP82348 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.46■□□□□ 0.55
SgcgP82348 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcgP82348 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.45■□□□□ 0.54
SgcgP82348 Gm26524-201ENSMUST00000192339 390 ntBASIC18.45■□□□□ 0.54
SgcgP82348 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.45■□□□□ 0.54
SgcgP82348 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcgP82348 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.45■□□□□ 0.54
SgcgP82348 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcgP82348 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcgP82348 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.44■□□□□ 0.54
SgcgP82348 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SgcgP82348 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.44■□□□□ 0.54
SgcgP82348 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.44■□□□□ 0.54
SgcgP82348 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcgP82348 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.43■□□□□ 0.54
SgcgP82348 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SgcgP82348 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.43■□□□□ 0.54
SgcgP82348 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SgcgP82348 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SgcgP82348 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcgP82348 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SgcgP82348 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SgcgP82348 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcgP82348 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcgP82348 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcgP82348 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcgP82348 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SgcgP82348 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcgP82348 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SgcgP82348 Gm20049-201ENSMUST00000219950 730 ntBASIC18.42■□□□□ 0.54
SgcgP82348 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms