Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp4P70343 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Casp4P70343 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp4P70343 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Casp4P70343 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp4P70343 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp4P70343 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp4P70343 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.57■□□□□ 0.72
Casp4P70343 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp4P70343 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp4P70343 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp4P70343 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Casp4P70343 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp4P70343 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.56■□□□□ 0.72
Casp4P70343 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.56■□□□□ 0.72
Casp4P70343 Gm42642-201ENSMUST00000200683 355 ntBASIC19.56■□□□□ 0.72
Casp4P70343 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp4P70343 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.56■□□□□ 0.72
Casp4P70343 Grk6-206ENSMUST00000224995 2971 ntBASIC19.56■□□□□ 0.72
Casp4P70343 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Casp4P70343 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 BC021767-201ENSMUST00000126387 1716 ntBASIC19.55■□□□□ 0.72
Casp4P70343 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Casp4P70343 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Casp4P70343 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Casp4P70343 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.55■□□□□ 0.72
Casp4P70343 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Casp4P70343 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.55■□□□□ 0.72
Casp4P70343 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp4P70343 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Casp4P70343 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Casp4P70343 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.54■□□□□ 0.72
Casp4P70343 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.54■□□□□ 0.72
Casp4P70343 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Casp4P70343 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp4P70343 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.53■□□□□ 0.72
Casp4P70343 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.53■□□□□ 0.72
Casp4P70343 Gm26571-201ENSMUST00000181399 666 ntBASIC19.53■□□□□ 0.72
Casp4P70343 Gm42778-201ENSMUST00000199644 553 ntBASIC19.53■□□□□ 0.72
Casp4P70343 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.53■□□□□ 0.72
Casp4P70343 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.53■□□□□ 0.72
Casp4P70343 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Casp4P70343 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.53■□□□□ 0.72
Casp4P70343 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casp4P70343 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.52■□□□□ 0.72
Casp4P70343 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms