Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Crnkl1P63154 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Crnkl1P63154 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Crnkl1P63154 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Crnkl1P63154 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crnkl1P63154 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Crnkl1P63154 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.51■□□□□ 0.55
Crnkl1P63154 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crnkl1P63154 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Crnkl1P63154 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crnkl1P63154 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.51■□□□□ 0.55
Crnkl1P63154 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.51■□□□□ 0.55
Crnkl1P63154 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Crnkl1P63154 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Crnkl1P63154 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crnkl1P63154 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crnkl1P63154 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crnkl1P63154 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crnkl1P63154 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crnkl1P63154 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crnkl1P63154 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Crnkl1P63154 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crnkl1P63154 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Crnkl1P63154 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.5■□□□□ 0.55
Crnkl1P63154 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Crnkl1P63154 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Crnkl1P63154 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crnkl1P63154 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crnkl1P63154 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Crnkl1P63154 Fst-202ENSMUST00000223640 2612 ntBASIC18.5■□□□□ 0.55
Crnkl1P63154 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Crnkl1P63154 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Gm9847-201ENSMUST00000052528 599 ntBASIC18.49■□□□□ 0.55
Crnkl1P63154 Gm9870-201ENSMUST00000063874 645 ntBASIC18.49■□□□□ 0.55
Crnkl1P63154 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Crnkl1P63154 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crnkl1P63154 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.48■□□□□ 0.55
Crnkl1P63154 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.48■□□□□ 0.55
Crnkl1P63154 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crnkl1P63154 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Crnkl1P63154 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Crnkl1P63154 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.47■□□□□ 0.55
Crnkl1P63154 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Crnkl1P63154 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Gm12922-201ENSMUST00000120626 809 ntBASIC18.47■□□□□ 0.55
Crnkl1P63154 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.47■□□□□ 0.55
Crnkl1P63154 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Crnkl1P63154 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Crnkl1P63154 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.47■□□□□ 0.55
Crnkl1P63154 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.47■□□□□ 0.55
Crnkl1P63154 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Crnkl1P63154 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Crnkl1P63154 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.46■□□□□ 0.55
Crnkl1P63154 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Crnkl1P63154 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.46■□□□□ 0.55
Crnkl1P63154 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Crnkl1P63154 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Crnkl1P63154 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Crnkl1P63154 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.46■□□□□ 0.55
Crnkl1P63154 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms