Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Abca1P41233 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Abca1P41233 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.51■□□□□ 0.07
Abca1P41233 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Abca1P41233 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.5■□□□□ 0.07
Abca1P41233 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Abca1P41233 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Abca1P41233 Gm27275-201ENSMUST00000184318 272 ntBASIC15.5■□□□□ 0.07
Abca1P41233 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.5■□□□□ 0.07
Abca1P41233 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.5■□□□□ 0.07
Abca1P41233 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Abca1P41233 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.5■□□□□ 0.07
Abca1P41233 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.5■□□□□ 0.07
Abca1P41233 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca1P41233 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca1P41233 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Abca1P41233 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca1P41233 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Abca1P41233 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.49■□□□□ 0.07
Abca1P41233 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca1P41233 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca1P41233 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Abca1P41233 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca1P41233 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Abca1P41233 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.48■□□□□ 0.07
Abca1P41233 Dio3-201ENSMUST00000097228 1449 ntBASIC15.48■□□□□ 0.07
Abca1P41233 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.48■□□□□ 0.07
Abca1P41233 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca1P41233 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Abca1P41233 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Abca1P41233 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.47■□□□□ 0.07
Abca1P41233 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.47■□□□□ 0.07
Abca1P41233 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Abca1P41233 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Abca1P41233 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca1P41233 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Abca1P41233 Rab3c-203ENSMUST00000224180 967 ntBASIC15.46■□□□□ 0.07
Abca1P41233 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Abca1P41233 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.46■□□□□ 0.07
Abca1P41233 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Abca1P41233 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Abca1P41233 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca1P41233 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abca1P41233 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca1P41233 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Abca1P41233 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.46■□□□□ 0.07
Abca1P41233 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca1P41233 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Abca1P41233 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
Abca1P41233 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Abca1P41233 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Abca1P41233 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Abca1P41233 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Abca1P41233 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Abca1P41233 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Abca1P41233 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca1P41233 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca1P41233 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca1P41233 Gm13836-201ENSMUST00000121159 501 ntBASIC15.45■□□□□ 0.06
Abca1P41233 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.45■□□□□ 0.06
Abca1P41233 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Abca1P41233 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca1P41233 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.45■□□□□ 0.06
Abca1P41233 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Abca1P41233 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Abca1P41233 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca1P41233 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca1P41233 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms