Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh4P39038 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh4P39038 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh4P39038 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh4P39038 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh4P39038 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh4P39038 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh4P39038 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdh4P39038 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh4P39038 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.89■□□□□ 0.45
Cdh4P39038 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.89■□□□□ 0.45
Cdh4P39038 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.89■□□□□ 0.45
Cdh4P39038 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh4P39038 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.88■□□□□ 0.45
Cdh4P39038 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cdh4P39038 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.88■□□□□ 0.45
Cdh4P39038 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cdh4P39038 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.88■□□□□ 0.45
Cdh4P39038 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh4P39038 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Cdh4P39038 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.87■□□□□ 0.45
Cdh4P39038 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Gm6420-201ENSMUST00000193885 723 ntBASIC17.87■□□□□ 0.45
Cdh4P39038 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.87■□□□□ 0.45
Cdh4P39038 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh4P39038 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cdh4P39038 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cdh4P39038 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cdh4P39038 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.86■□□□□ 0.45
Cdh4P39038 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.86■□□□□ 0.45
Cdh4P39038 Gm37179-201ENSMUST00000194862 823 ntBASIC17.86■□□□□ 0.45
Cdh4P39038 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.86■□□□□ 0.45
Cdh4P39038 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cdh4P39038 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cdh4P39038 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh4P39038 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Cdh4P39038 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.85■□□□□ 0.45
Cdh4P39038 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh4P39038 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cdh4P39038 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cdh4P39038 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Nespas-201ENSMUST00000143738 1083 ntBASIC17.84■□□□□ 0.45
Cdh4P39038 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.84■□□□□ 0.45
Cdh4P39038 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.84■□□□□ 0.45
Cdh4P39038 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cdh4P39038 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.84■□□□□ 0.45
Cdh4P39038 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh4P39038 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh4P39038 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh4P39038 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms