Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PdgfrbP05622 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PdgfrbP05622 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PdgfrbP05622 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.94■□□□□ 0.62
PdgfrbP05622 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PdgfrbP05622 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.93■□□□□ 0.62
PdgfrbP05622 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PdgfrbP05622 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PdgfrbP05622 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
PdgfrbP05622 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.93■□□□□ 0.62
PdgfrbP05622 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PdgfrbP05622 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PdgfrbP05622 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PdgfrbP05622 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PdgfrbP05622 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Gm13146-201ENSMUST00000118508 780 ntBASIC18.92■□□□□ 0.62
PdgfrbP05622 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.92■□□□□ 0.62
PdgfrbP05622 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PdgfrbP05622 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.91■□□□□ 0.62
PdgfrbP05622 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.91■□□□□ 0.62
PdgfrbP05622 Gm5874-201ENSMUST00000096101 508 ntBASIC18.91■□□□□ 0.62
PdgfrbP05622 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PdgfrbP05622 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PdgfrbP05622 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
PdgfrbP05622 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PdgfrbP05622 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PdgfrbP05622 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PdgfrbP05622 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PdgfrbP05622 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PdgfrbP05622 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PdgfrbP05622 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.89■□□□□ 0.61
PdgfrbP05622 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.89■□□□□ 0.61
PdgfrbP05622 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PdgfrbP05622 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PdgfrbP05622 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PdgfrbP05622 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PdgfrbP05622 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PdgfrbP05622 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.88■□□□□ 0.61
PdgfrbP05622 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PdgfrbP05622 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
PdgfrbP05622 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PdgfrbP05622 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms