Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Apba3O88888 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Apba3O88888 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Apba3O88888 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.56■□□□□ 0.88
Apba3O88888 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Rab3c-203ENSMUST00000224180 967 ntBASIC20.56■□□□□ 0.88
Apba3O88888 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Apba3O88888 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Apba3O88888 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Apba3O88888 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Apba3O88888 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apba3O88888 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apba3O88888 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apba3O88888 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Apba3O88888 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.55■□□□□ 0.88
Apba3O88888 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Apba3O88888 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.55■□□□□ 0.88
Apba3O88888 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Apba3O88888 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Apba3O88888 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apba3O88888 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Apba3O88888 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.54■□□□□ 0.88
Apba3O88888 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.54■□□□□ 0.88
Apba3O88888 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Apba3O88888 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Apba3O88888 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.53■□□□□ 0.88
Apba3O88888 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Apba3O88888 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.53■□□□□ 0.88
Apba3O88888 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.53■□□□□ 0.88
Apba3O88888 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.53■□□□□ 0.88
Apba3O88888 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.53■□□□□ 0.88
Apba3O88888 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Apba3O88888 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Apba3O88888 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.53■□□□□ 0.88
Apba3O88888 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.53■□□□□ 0.88
Apba3O88888 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Apba3O88888 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Apba3O88888 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Apba3O88888 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Apba3O88888 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Apba3O88888 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Apba3O88888 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Apba3O88888 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Apba3O88888 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Apba3O88888 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Apba3O88888 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Apba3O88888 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Apba3O88888 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Apba3O88888 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.51■□□□□ 0.87
Apba3O88888 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Apba3O88888 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Apba3O88888 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Apba3O88888 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Apba3O88888 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.5■□□□□ 0.87
Apba3O88888 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Apba3O88888 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Apba3O88888 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Apba3O88888 Gm37856-201ENSMUST00000191634 999 ntBASIC20.5■□□□□ 0.87
Apba3O88888 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Apba3O88888 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.5■□□□□ 0.87
Apba3O88888 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Apba3O88888 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Apba3O88888 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Apba3O88888 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Apba3O88888 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Apba3O88888 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Apba3O88888 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.49■□□□□ 0.87
Apba3O88888 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Apba3O88888 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.49■□□□□ 0.87
Apba3O88888 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms