Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col5a1O88207 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col5a1O88207 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col5a1O88207 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Col5a1O88207 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.09■□□□□ 0.33
Col5a1O88207 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col5a1O88207 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col5a1O88207 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col5a1O88207 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Col5a1O88207 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col5a1O88207 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col5a1O88207 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col5a1O88207 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.08■□□□□ 0.33
Col5a1O88207 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col5a1O88207 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col5a1O88207 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col5a1O88207 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col5a1O88207 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col5a1O88207 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col5a1O88207 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col5a1O88207 Gm11249-201ENSMUST00000117071 859 ntBASIC17.07■□□□□ 0.32
Col5a1O88207 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.07■□□□□ 0.32
Col5a1O88207 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col5a1O88207 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.07■□□□□ 0.32
Col5a1O88207 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Col5a1O88207 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a1O88207 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.06■□□□□ 0.32
Col5a1O88207 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.06■□□□□ 0.32
Col5a1O88207 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.06■□□□□ 0.32
Col5a1O88207 Gm6433-201ENSMUST00000118634 875 ntBASIC17.06■□□□□ 0.32
Col5a1O88207 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.06■□□□□ 0.32
Col5a1O88207 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col5a1O88207 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a1O88207 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Col5a1O88207 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Col5a1O88207 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.05■□□□□ 0.32
Col5a1O88207 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.05■□□□□ 0.32
Col5a1O88207 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.05■□□□□ 0.32
Col5a1O88207 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Col5a1O88207 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col5a1O88207 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Col5a1O88207 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a1O88207 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Col5a1O88207 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Col5a1O88207 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms