Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6dO55057 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6dO55057 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6dO55057 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pde6dO55057 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6dO55057 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6dO55057 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6dO55057 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6dO55057 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pde6dO55057 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Pde6dO55057 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pde6dO55057 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pde6dO55057 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pde6dO55057 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pde6dO55057 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.8□□□□□ -0.04
Pde6dO55057 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pde6dO55057 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pde6dO55057 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pde6dO55057 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pde6dO55057 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pde6dO55057 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pde6dO55057 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pde6dO55057 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Pde6dO55057 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.79□□□□□ -0.04
Pde6dO55057 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pde6dO55057 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pde6dO55057 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pde6dO55057 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pde6dO55057 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.79□□□□□ -0.04
Pde6dO55057 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.79□□□□□ -0.04
Pde6dO55057 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pde6dO55057 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pde6dO55057 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pde6dO55057 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.78□□□□□ -0.04
Pde6dO55057 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pde6dO55057 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pde6dO55057 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pde6dO55057 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6dO55057 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pde6dO55057 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pde6dO55057 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
Pde6dO55057 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.77□□□□□ -0.04
Pde6dO55057 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6dO55057 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6dO55057 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.77□□□□□ -0.05
Pde6dO55057 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Pde6dO55057 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6dO55057 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6dO55057 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pde6dO55057 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms