Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.12■□□□□ 0.49
Cacna1bO55017 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.12■□□□□ 0.49
Cacna1bO55017 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Cacna1bO55017 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cacna1bO55017 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.12■□□□□ 0.49
Cacna1bO55017 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1bO55017 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.11■□□□□ 0.49
Cacna1bO55017 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.11■□□□□ 0.49
Cacna1bO55017 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Gm6659-201ENSMUST00000174752 547 ntBASIC18.11■□□□□ 0.49
Cacna1bO55017 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1bO55017 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cacna1bO55017 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Cacna1bO55017 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.1■□□□□ 0.49
Cacna1bO55017 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cacna1bO55017 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Cacna1bO55017 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1bO55017 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.09■□□□□ 0.49
Cacna1bO55017 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.09■□□□□ 0.49
Cacna1bO55017 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.09■□□□□ 0.49
Cacna1bO55017 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cacna1bO55017 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Cacna1bO55017 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cacna1bO55017 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.09■□□□□ 0.49
Cacna1bO55017 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.09■□□□□ 0.49
Cacna1bO55017 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cacna1bO55017 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cacna1bO55017 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Cacna1bO55017 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1bO55017 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1bO55017 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.08■□□□□ 0.48
Cacna1bO55017 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1bO55017 Gm5417-201ENSMUST00000079706 384 ntBASIC18.08■□□□□ 0.48
Cacna1bO55017 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cacna1bO55017 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cacna1bO55017 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.07■□□□□ 0.48
Cacna1bO55017 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cacna1bO55017 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cacna1bO55017 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cacna1bO55017 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1bO55017 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1bO55017 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.06■□□□□ 0.48
Cacna1bO55017 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.06■□□□□ 0.48
Cacna1bO55017 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1bO55017 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1bO55017 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1bO55017 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1bO55017 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms