Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Gm9987-201ENSMUST00000069768 567 ntBASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
B020004C17RikJ3QP07 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.1■□□□□ 0.97
B020004C17RikJ3QP07 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
B020004C17RikJ3QP07 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
B020004C17RikJ3QP07 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
B020004C17RikJ3QP07 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
B020004C17RikJ3QP07 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
B020004C17RikJ3QP07 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
B020004C17RikJ3QP07 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
B020004C17RikJ3QP07 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
B020004C17RikJ3QP07 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
B020004C17RikJ3QP07 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
B020004C17RikJ3QP07 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
B020004C17RikJ3QP07 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
B020004C17RikJ3QP07 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
B020004C17RikJ3QP07 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Gm6433-201ENSMUST00000118634 875 ntBASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Zfp783-201ENSMUST00000095946 670 ntBASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
B020004C17RikJ3QP07 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
B020004C17RikJ3QP07 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms