Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TprF6ZDS4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.21■□□□□ 0.35
TprF6ZDS4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TprF6ZDS4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TprF6ZDS4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TprF6ZDS4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TprF6ZDS4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TprF6ZDS4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TprF6ZDS4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TprF6ZDS4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.21■□□□□ 0.35
TprF6ZDS4 Mir5122-201ENSMUST00000175004 89 ntBASIC17.21■□□□□ 0.35
TprF6ZDS4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TprF6ZDS4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Mir1199-201ENSMUST00000117015 119 ntBASIC17.2■□□□□ 0.34
TprF6ZDS4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TprF6ZDS4 Ank2-226ENSMUST00000189368 339 ntBASIC17.2■□□□□ 0.34
TprF6ZDS4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.2■□□□□ 0.34
TprF6ZDS4 Gm7461-201ENSMUST00000058918 827 ntBASIC17.2■□□□□ 0.34
TprF6ZDS4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.2■□□□□ 0.34
TprF6ZDS4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
TprF6ZDS4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TprF6ZDS4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TprF6ZDS4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.19■□□□□ 0.34
TprF6ZDS4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TprF6ZDS4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TprF6ZDS4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TprF6ZDS4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TprF6ZDS4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TprF6ZDS4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TprF6ZDS4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TprF6ZDS4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.18■□□□□ 0.34
TprF6ZDS4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.18■□□□□ 0.34
TprF6ZDS4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.18■□□□□ 0.34
TprF6ZDS4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TprF6ZDS4 Gm15378-201ENSMUST00000121894 207 ntBASIC17.18■□□□□ 0.34
TprF6ZDS4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TprF6ZDS4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TprF6ZDS4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TprF6ZDS4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.17■□□□□ 0.34
TprF6ZDS4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.17■□□□□ 0.34
TprF6ZDS4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TprF6ZDS4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TprF6ZDS4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.16■□□□□ 0.34
TprF6ZDS4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.16■□□□□ 0.34
TprF6ZDS4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TprF6ZDS4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.16■□□□□ 0.34
TprF6ZDS4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TprF6ZDS4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TprF6ZDS4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.15■□□□□ 0.34
TprF6ZDS4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TprF6ZDS4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TprF6ZDS4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TprF6ZDS4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TprF6ZDS4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TprF6ZDS4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms